Glad I'm not the only person who likes linked brakes.. I have linked on my Blackbird, and I have found that for 95% of my riding it is a better and easier experience than independant brakes.
I guess it is the same reason that the NC700 was designed in the way it was, which is that if something is used in a certain way for the majority of it's life, sacrificing something else to make it do that thing better is a generally safe bet.
The only time linked brakes are a pain is if you're in a corner which you haven't read properly and you want to drop the bike in harder mid corner by applying the rear. With linked brakes it scrubs the speed off, but you don't tighten the turn as the front gets applied too.. If you know that it behaves like that it's not a surprise, but I guess I should have read the road better. Still better than when I first panic broke mid corner and stood the bike up on the front brake.. That very nearly ended badly!